Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911456.1_cds_XP_016461429.1_54752
CDS Infomation

[gene=LOC107784766] [db_xref=GeneID:107784766] [protein=E3 ubiquitin-protein ligase RGLG2-like] [protein_id=XP_016461429.1] [location=complement(join(24087..24167,24265..24321,24420..24696,24816..24943,25028..25133,25265..25344,25519..25616,25705..25818,25929..26069,26172..26256,28358..28648))] [gbkey=CDS]
Sequence

ATGGGTGGAAAGAGTTCAAGAGAGGATAGTTGGAGGCAAACTTCATCGACTCGATCTTCT
TGGAATCAATACAATTATCCTCAAACTCAATCATCTTATCCACAGCAAGATAGTTACAAC
TACCCACCATCCCATCACCAGCAGGCTGTTCCTTCCTATGCACCTCCACCACCCCAACAG
AGTTATCCACCTCCTCCACCCCAACAACAGAATTATCCCTCTCATGTTCCAAAACCGAGA
CTTGATCGGAGATACTCCAGAATTGCCGACAATTATTCTTCCCTGGATGAGGTGACTGAA
GCCCTTGCACGAGAGGGCTTGGAGTCTTCAAATCTGATTGTGGGCATTGATTTCACCAAG
AGCAATGAATGGACAGGTAAGAGGTCTTTTGGTGGTCGGAGCCTACATCACATCGGGCAG
AATTTGAACCCATATGAGCAAGCAATTTCTATAATTGGAAAAACCTTGGCCGCATTTGAT
GAGGATAACTTAATTCCGTGTTTTGGATTTGGAGATGCATCAACTCATGATCAAGATGTA
TTCAGTTTCTTTCCCGATGAAAGATTTTGTAATGGTTTTGAGGAAGTTCTATCTCGTTAC
AGAGAAATTGTCCCCGAGCTAAAGCTTGCAGGACCAACGTCATTTGCCCCGGTCATTGAA
ATGGCCATGACAATAGTTGAGCAGAGTGGTGGCCAGTACCATGTTCTAGTAATCATTGCA
GATGGGCAGGTAACTAGAAGTGTCGATACTGGACATGGACAATTAAGTCCGCAGGAGCAG
AAAACAGTAGATGCAATCGTACGAGCAAGTAAGTTTCCCTTGTCAATTATACTTGTTGGG
GTTGGCGATGGACCCTGGGATATGATGAAGGAATTTGATGATAATATTCCTGCTCGGGAC
TTTGATAATTTCCAGTTTGTCAATTTCACGGAGATCATGGCCAAAAATGTATCTCATACT
CGAAAAGAGACGGAGTTTGCTCTTTCAGCATTGATGGAAATCCCTACACAATATAAAGCA
ACCGTGGTGCTTAACTTACTGGGTGGACAAAGTGGAACGTCTCCTGGTAGGGTAGCTCTT
CCCCCTCCTATGTATGGGGCAACATCTGTCGGTGGTTCAAAGCCCTCACGTGCAGCGAGT
TTTCAGCAGCCCACAAGCGCTTATTATGGTTATGGAAGCCCTGCTGATGCACCTCCGCAT
TTTCAGCAGACTCCAAGTTCGTATTATGATCAGACTCGCTCAGTTGACACTGCTCCATCT
GCTCCCAGCTCTCCCTACATTGCTCCATCTGCTACCACCTCCTCTACATATGACAACCAG
GTTTGCCCCATTTGCCTTACTAACCCAAAAGACATGGCCTTTGGCTGTGGGCATCAGACA
TGTTGTGAGTGCGGGAGAGCACTTGAAAATTGCCCTATATGTCGAAGTTCAATTCAAACC
CGAATAAAGCTCTACTGA

Peptide Sequence

PEP ID

XP_016461429.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Nicotiana tabacum]
Sequence

MGGKSSREDSWRQTSSTRSSWNQYNYPQTQSSYPQQDSYNYPPSHHQQAVPSYAPPPPQQ
SYPPPPPQQQNYPSHVPKPRLDRRYSRIADNYSSLDEVTEALAREGLESSNLIVGIDFTK
SNEWTGKRSFGGRSLHHIGQNLNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDV
FSFFPDERFCNGFEEVLSRYREIVPELKLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIA
DGQVTRSVDTGHGQLSPQEQKTVDAIVRASKFPLSIILVGVGDGPWDMMKEFDDNIPARD
FDNFQFVNFTEIMAKNVSHTRKETEFALSALMEIPTQYKATVVLNLLGGQSGTSPGRVAL
PPPMYGATSVGGSKPSRAASFQQPTSAYYGYGSPADAPPHFQQTPSSYYDQTRSVDTAPS
APSSPYIAPSATTSSTYDNQVCPICLTNPKDMAFGCGHQTCCECGRALENCPICRSSIQT
RIKLY

Transcript Sequence

Gene sequence data has not been registered.